BEGIN:VCALENDAR
VERSION:2.0
PRODID:-//ZContent.net//ZapCalLib 1.0//EN
CALSCALE:GREGORIAN
METHOD:PUBLISH
BEGIN:VEVENT
SUMMARY:Genomes and gene expression in marine microbial communities
LOCATION:Anatomy/Zoology Building W118
TZID:America/Denver
DTSTART:20140201T000000
UID:2026-04-17-22-44-31@natsci.colostate.edu
DTSTAMP:20260417T224431
Description:Since 2003\, the J. Craig Venter Institute has conducted a stud
 y of marine microbial communities using shotgun sequencing. Â Samples have
  been collect from every ocean\, several major inland seas\, lakes\, and t
 he Amazon River. I will present two studies emerging from this dataset. Â 
 The first examines the results of a collaborative survey with the Scripps 
 Institution of Oceangraphy in the eastern subtropical Pacific. Â Here\, me
 tagenomics and metatranscriptomics were used to examine marine microbes ac
 ross gradients in light and primary productivity. Â The results highlight 
 a discordance between genomic abundance and transcriptional activity\, and
  suggests that relatively rare\, but fast growing bacteria contribute disp
 roportionately to biogeochemical processes. Â The results also suggest tha
 t a previously overlooked Â class of algae\, the Pelagophyceae\, contribut
 e disproportionately to nitrate reduction. Â Second\, I will present Â a Â
  metagenomic assembly generated from 227 surface ocean metagenome. Â This 
 assembly\, 3Gbp in total including over 9000 contigs greater than 30kbp in
  length\, provides core and pan genomes for roughly 85% of the taxa found 
 in the ocean\, the vast majority of which are still uncultivated. Â Multiv
 ariate analyses identify the environmental variables\, specifically temper
 ature and chlorophyll a\, that drive differentiation within these uncultiv
 ated lineages and between communities. Â Finally\, select metabolic insigh
 ts into what was previously biological dark matter will be presented.  4:0
 0 pm
END:VEVENT
END:VCALENDAR
